Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13831g00001 ATGATCGAGCACACTAAAAAGCTTGTGGAAGATAAATTTACAACACTTAATGGCTACGAACACAATGCCGAGGTAATATATGGAGACACAGATTCAGTCATGGTACAATTTGGTGTTTCTGCTGTAGAAGAGGCCATGAACTTGGGGAGAGAAGCTGCTGAATATATTAGCGGAACTTTCATAAAACCTATCAAACTAGAATTTGAGAAGATATACTATCCATATCTCCTGATCAGCAAGAAGAGATATGCTGGTTTGTTTTGGACAAAACCAGATAATTTTGACAAAATGGACACTAAAGGTATTGAAACAGTTCGAAGAGACAATTGCTTGTTGGTCAAAAACTTGGTAAACGACTGCCTTCACAAAATACTGATTGACAGGGACGTTCCTGGGGCAGTCCAGTATGTCAAGAATGCAATTTCAGATCTTCTCATGAACCGTATGGATTTATCACTTCTGGTTATTACGAAGGGTTTGACAAAGACAGGAGATGATTATGAAGTAAAGACAGCTCATGTTGAACTCGCTGAAAGGATGCGCAAG 546 0.3901 MIEHTKKLVEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEYISGTFIKPIKLEFEKIYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIDRDVPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKTAHVELAERMRK 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13831g00001 182 Gene3D - 102 182 IPR042087 -
Trme13831g00001 182 Pfam DNA polymerase family B 1 182 IPR006134 GO:0000166|GO:0003677
Trme13831g00001 182 Gene3D Palm domain of DNA polymerase 2 101 IPR023211 -
Trme13831g00001 182 ProSitePatterns DNA polymerase family B signature. 27 35 IPR017964 GO:0000166|GO:0003676
Trme13831g00001 182 SUPERFAMILY DNA/RNA polymerases 1 181 IPR043502 -
Trme13831g00001 182 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13831g00001 Trme-Chr13831 151 1452 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13831g00001 1 182 Core DNA Replication Machinery Family AT5G63960 85.165 4.05e-104 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13831g00001 K02327 - gmx:100817379 359.762