Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13827g00001 ATGGCACATGAAGTGATTCTGCTAGATTTTTGGCCTAGTCCTTTTGGAATAAGAGTGAGAATAGCCCTTGCTGAAAAGGGTATAAAGTATGAATACATAGAGGAAGACTTGATGTCAATGAAAAAGAGCCCTTTGTTGCTAGAAATGAACCCAGTTCACAAGAAATCCCCGGTTCTCATCCACAATGGCAAACCCATTTGTGAATCTCTAATTGCTGTTCAGTATATTGATGAGGTTTGGAATGATAAATCTCCTCTCTTGCCTTCTGATCCTTATCAGAGATCACAAGCTAGATTCTGGGCTGCCTATGTTGATAACAAGAATATTGGATCACTGGTTAAACTTCATAGTTGA 354 0.3898 MAHEVILLDFWPSPFGIRVRIALAEKGIKYEYIEEDLMSMKKSPLLLEMNPVHKKSPVLIHNGKPICESLIAVQYIDEVWNDKSPLLPSDPYQRSQARFWAAYVDNKNIGSLVKLHS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13827g00001 117 SFLD Main (cytGST) 7 114 - -
Trme13827g00001 117 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 108 IPR045073 -
Trme13827g00001 117 FunFam Tau class glutathione S-transferase 1 89 - -
Trme13827g00001 117 Gene3D Glutaredoxin 1 86 - -
Trme13827g00001 117 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Trme13827g00001 117 SFLD Glutathione Transferase (cytosolic) 7 114 IPR040079 -
Trme13827g00001 117 CDD GST_N_Tau 5 80 - -
Trme13827g00001 117 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Trme13827g00001 117 Gene3D - 87 117 - -
Trme13827g00001 117 SUPERFAMILY Thioredoxin-like 4 107 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13827g00001 Trme-Chr13827 359 840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13827g00001 1 107 Glutathione S-transferase Gene Family AT1G78340 74.766 5.76e-57 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13827g00001 K00799 - gmx:547520 190.274