Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13817g00001 ATGGATTTGTCCGGTTCATTCTCGATCATACTTGGTCTACTTGTTCCAATTCTTCAGGAACCATTTAGACAGATTTTGAAGCGAATACCGGGCACCATGGACTGGAAAATCGAGCGTACTAACAAAAACCTAGGTGGCCGTCTTGATGAGATTGTAGAGAAGAGAATGAACGATAGGAAACGTAGTTCAAAGGATTTCTTGTCACTTATACTAAATGCTAGAGAATCAAAAGCTGTTTCAGAAAATGTGTTCACACCTGAATATATCAGTGCTGTTACCTATGAACACTTGCTTGCTGGATCAGCAACTACTTCCTTTACTTTGTCTTCTGTTGTCTATTTGGTAGCTGCACATCCAGAAGTTGAGAAAAAGTTGCTTGAAGAGATTGATGGGTTTGGTTCAATAGATCATATACCTACTTCTCAAGATCTTCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCAATGCGGATTTACATTGTATCACCATTAGTAGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGAACTTGGGTTTGGCTAGCTCTTGGCGTTCTAGCAAAAGATCCGAAAAACTTTCCAGAGCCAGAAAAGTTCAAACCAGAACGGTTTGATCCTAACTGTGAAGAAATGAAACGAAGGCACCCTTATGCTTTCATACCATTTGGAATTGGTCCTCGGGCTTGCATTGGTCAGAAATTTTCCATACAAGAAATCAAGCTTTCTCTCATTCATTTATACAGAAAATACTTGTTTCGGCATTCACCTAATATGGAAAATCCTTTAGAACTCGAATATGGCATAGTCCTCAACTTCAAGCATGGTGTCAAACTGAGAGCCATAAAAAGAACATTGAGGAGCTGCTAA 897 0.3946 MDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIERTNKNLGGRLDEIVEKRMNDRKRSSKDFLSLILNARESKAVSENVFTPEYISAVTYEHLLAGSATTSFTLSSVVYLVAAHPEVEKKLLEEIDGFGSIDHIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPEKFKPERFDPNCEEMKRRHPYAFIPFGIGPRACIGQKFSIQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKHGVKLRAIKRTLRSC 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13817g00001 298 PRINTS E-class P450 group I signature 239 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS E-class P450 group I signature 229 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS E-class P450 group I signature 108 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS E-class P450 group I signature 192 216 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS E-class P450 group I signature 88 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PANTHER THROMBOXANE-A SYNTHASE 1 294 - -
Trme13817g00001 298 PRINTS P450 superfamily signature 99 116 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS P450 superfamily signature 230 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 PRINTS P450 superfamily signature 239 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 Pfam Cytochrome P450 21 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 Gene3D Cytochrome P450 3 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme13817g00001 298 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 232 241 IPR017972 GO:0005506|GO:0016705
Trme13817g00001 298 SUPERFAMILY Cytochrome P450 22 293 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13817g00001 Trme-Chr13817 45 1350 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13817g00001 19 293 Cytochrome P450 AT2G26170 76.364 1.26e-159 450