Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13815g00001 AAAAGCTTCAATTCAAGAACAGCTTCTTACCCTCTTTCACGTTCTCCTTCTCTTAATCTTAGCCCTATTGAAAGTATCAATTCGTTTCCACCTCAGAACTCTGCATCTCCTTGTTTTTCTTCTTCTCCTATGCAGATGGAAGATTTTGATTTGAATTTGGATGGTAAGAATGTTCAAGTTAGCAAACTCCCTCCTCCTGCTCCGCCGCCTTTGCCGCCGAGGTTTTGGGAGACTCCGGTGGTGGCTTCCCTAGATGTTACTGTTGAGAATGAAGAAAGTTCAAAGCCAAAGTTAAAGGCTTTACATTGGGATAAAGTTAAGGCCAGCTCAGATAGGGCCATGGTTTGGGATCACTTGAGACCAAGTTCATTTCAGTTGAATGAAGATATGATTGAGTCACTCTTTATGGTAAATAATTCCAATTTCAATGGAAATTCTGCTTTGGCTCCTAAAGATAATGCTCGGAGCCAAATAATCCATGCTGCTCCCATGCCGCCAGAAAATAGGGTGCTTGATCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTCGAGCGCTGAATGTAACTATTGATGAAGTTTGTGAAGCCCTTCGGGAAGGCAATTGTGATACACTGGGAACAGAACTTTTAGAAAGTTTATTGAAGATGGCTCCAACTAAAGAGGAAGAATCTAAGCTGAAGGAGTTTAAAGACGAGTCACCCTTCAAGCTAGGTCCGGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTCAAAAGAATGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAAATAGAATACCTGAAAAAGTCCTTTGATACTC 838 0.4069 KSFNSRTASYPLSRSPSLNLSPIESINSFPPQNSASPCFSSSPMQMEDFDLNLDGKNVQVSKLPPPAPPPLPPRFWETPVVASLDVTVENEESSKPKLKALHWDKVKASSDRAMVWDHLRPSSFQLNEDMIESLFMVNNSNFNGNSALAPKDNARSQIIHAAPMPPENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTLGTELLESLLKMAPTKEEESKLKEFKDESPFKLGPAEKFLKVMLDIPFAFKRMDAMLYIANFDSEIEYLKKSFDT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13815g00001 279 SUPERFAMILY Formin homology 2 domain (FH2 domain) 64 278 - -
Trme13815g00001 279 ProSiteProfiles Formin homology-2 (FH2) domain profile. 88 279 IPR015425 -
Trme13815g00001 279 MobiDBLite consensus disorder prediction 1 41 - -
Trme13815g00001 279 Pfam Formin Homology 2 Domain 90 278 IPR015425 -
Trme13815g00001 279 Gene3D Formin, FH2 domain 84 279 IPR042201 -
Trme13815g00001 279 PANTHER FORMIN-RELATED 14 279 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13815g00001 Trme-Chr13815 1 1549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13815g00001 91 279 FH2 protein (formin) Gene Family AT3G25500 71.354 1.69e-83 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13815g00001 - - gmx:100786203 369.007