Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13813g00001 ATGAACAACAACATATGGAACTTATCAAAGGATGATATTTTACCTTCTTTGCGTCTGAGTTATCAGTATCTTCCCTCTTATTTGAAAAGATGTTTTGCCTATTGCTCAATTTTTCCAAAGGGTTATCCCATTGATAGGAAGCAAATGGTTTTGTTGTGGATGGCACAAGGCTTCCTTGAACATTCTATGGTTGAAAAAGCAGAAGAGGAGGTAGGTAATGAGTACTTTACTGAATTGTTGTCAAGATCCTTAATTGAACAATTGAATGATGATACTGATGGAGAAAGGTTTGTCATGCATTGCCTTGTACATGATTTAGCAACAATTGTATCTGGGAAAAGTTGTTCCAAGCTTGAATCTGGTCGTGGTAGAATTCACCATTTTTTGTATCATCAAGAAGAGTATGACCTTTACAAGAAGTTTGAAATTGTTGATGATTTCGAATGCTTGCGAAGCTTCCTATCCATTGAYTTCTGKTGGAGAATGAATTACATATCCAGCAAGGTGCTTCGTGTATTGMTACCMTCACATGGAAGGCTACGTGCTTTATCGATATCGCATTATTCTAACATCACCACGTTGCCGGATTCACTTGGCAGTTTGGTGCAGTTGCGGTATCTAAATCTCTCGCGCACTGGAATCAAATACTTGCCTGATACCATCTGCGACCTTTACTATTTGCAAACCTTGAAATTATCAGGGTGCAGAGAACTCATTGAATTGCCTGCACATGTTGGGAATTTAATTAATTTACGTCACCTTGATATCAGCCATACAAATATAAAGGAGATGCCAATGCAACTTGTTGAACTAGAAAACCTTCAAACTCTCACTGTTTTTGTAGTGGGCGAGCAAGAAGTTGGGTTAAGTGTCAGAGAGCTTTCAAAGTTTCCTAATCTTAGGGGAAAACTTCACATCCAGAACCTGCATAAAGTCATTGATGTTAGTGAGATGTGTGATACTAAATTGAAGAGTAAAGAACACATTGAAGAGTTATCTTTATATTGGGATAAACAAACTGAAGATTCACCATCACAGGAAGTTATTCTTGATGAGTTACAACCATCAACAAACTTGAAGAAATTGAGCATCNGCTTCTATGGTGGAACAAGCTTTCCAAGTTGGTTGGGAGATTGTTCGTTTTCTAACATGGTGTACCTTTGCATCAAATCTTGTGAGTATTGCACAACACTTCCTCCATTAGGGCAACTACCTTCTCTCAAAGACCTTGAGATTGATGGTATGAGCAAAGTGGAAACAATTGGCCCAGAGTTCTATGGCATGATAGGAGGAAGTACTAATTCCCCATTCCAACCATTTCCATCTCTCGAGAAGCTACATTTTGAGAGGATGTCTAATTGGAAAGAATGGCTTTCCTTCGGAGGCAGCAAGTTTCCTTTTCCTCGGCTTAAAACCCTGTCTTTAAATGACTGTTCAGAACTGAGGGGACATTTGCCTAGTCATCTTCCTTCCATAGAGAAAATTACAATGT 1492 0.3867 MNNNIWNLSKDDILPSLRLSYQYLPSYLKRCFAYCSIFPKGYPIDRKQMVLLWMAQGFLEHSMVEKAEEEVGNEYFTELLSRSLIEQLNDDTDGERFVMHCLVHDLATIVSGKSCSKLESGRGRIHHFLYHQEEYDLYKKFEIVDDFECLRSFLSIDFXWRMNYISSKVLRVLJPSHGRLRALSISHYSNITTLPDSLGSLVQLRYLNLSRTGIKYLPDTICDLYYLQTLKLSGCRELIELPAHVGNLINLRHLDISHTNIKEMPMQLVELENLQTLTVFVVGEQEVGLSVRELSKFPNLRGKLHIQNLHKVIDVSEMCDTKLKSKEHIEELSLYWDKQTEDSPSQEVILDELQPSTNLKKLSIXFYGGTSFPSWLGDCSFSNMVYLCIKSCEYCTTLPPLGQLPSLKDLEIDGMSKVETIGPEFYGMIGGSTNSPFQPFPSLEKLHFERMSNWKEWLSFGGSKFPFPRLKTLSLNDCSELRGHLPSHLPSIEKITM 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13813g00001 497 Gene3D - 16 109 IPR036388 -
Trme13813g00001 497 FunFam Probable disease resistance protein At1g63360 21 109 - -
Trme13813g00001 497 SUPERFAMILY L domain-like 98 487 - -
Trme13813g00001 497 Gene3D Ribonuclease Inhibitor 145 497 IPR032675 -
Trme13813g00001 497 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 140 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13813g00001 Trme-Chr13813 1 1492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13813g00001 191 277 WRKY Transcription Factor Family AT4G12020 39.773 7.90e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13813g00001 - - mtr:120579496 653.284