Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138082g00001 ATGCCGTTAATTTATGCATGTTTGCAGAGATTTTGTTCTGACGCCTTGGAGGAGCACATAAGACAAGAGCTTGTTCCTGCAAGTGAGATAAAGGTGACTTTTTCAGATATTGGTGCATTGGATGATGTTAAAGAATCACTTCAAGAAGYGGTTATGCTTCCCCTTAGAAGACCAGATCTTTTCAAAGGCAATGGGATTCTGAAGCCGTGTAAAGGTGTGTTGCTGTTTGGACCTCCCGGTACAGGAAAAACRATGCTTGCAAAGGCAATTGCAAAAGAAGCTGGAGCAAGTTTCATCAATGTCTCTTCGTCCACAATACATTCAATGTGGCACGGACAATCTGAAAAGAACGTCCGAGCTTTGTTTTCAGCAGCGGCAAAGGTTGCCCCAACTATTATTTTCATTGATGAAGTTGAT 417 0.4197 MPLIYACLQRFCSDALEEHIRQELVPASEIKVTFSDIGALDDVKESLQEXVMLPLRRPDLFKGNGILKPCKGVLLFGPPGTGKTMLAKAIAKEAGASFINVSSSTIHSMWHGQSEKNVRALFSAAAKVAPTIIFIDEVD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138082g00001 139 Gene3D - 31 139 IPR027417 -
Trme138082g00001 139 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 15 139 - -
Trme138082g00001 139 Pfam ATPase family associated with various cellular activities (AAA) 73 139 IPR003959 GO:0005524|GO:0016887
Trme138082g00001 139 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 139 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138082g00001 Trme-Chr138082 1 417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138082g00001 31 139 Calmodulin-binding Proteins AT3G56690 45.872 1.14e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138082g00001 - - tpra:123903814 250.751