Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme138064g00001 TGGGAAGTAACTTTGCCGGCGGAGGAAGTTCCGCCGGAGCTTCCTGAGCCGGCACTTGGAATCAATTTTGCTAGAGATGGCATGAACCGAAAGGACTGGCTTTCTCTTGTTGCTGTACACAGTGATTCGTGGTTGCTTTCGGTGGCGTTTTATCTTGGAGCTCGTCTTAACCGCAATGAAAGGTTTATGTATGCATTCCTTGTTTTGCAGTAA 213 0.4789 WEVTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSVAFYLGARLNRNERFMYAFLVLQ 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme138064g00001 70 PANTHER CPG BINDING PROTEIN 1 61 IPR045104 GO:0006355|GO:0042393
Trme138064g00001 70 Pfam Alfin 1 61 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme138064g00001 Trme-Chr138064 86 467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme138064g00001 1 61 Alfin-like Transcription Factor Family AT3G11200 91.803 1.08e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme138064g00001 K26274 - pop:7487323 125.176