Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1379667g00001 ATGACAACCTCTGCAGACGAAGGACAATTTTTGAGCATGCTCCTTAAACTTATCAATGCCAAGAACACCATGGAAATTGGTGTCTACACTGGTTACTCCCTCCTTGCCACTGCCCTTGCTCTTCCTGAA 129 0.4574 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALALPE 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1379667g00001 43 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 42 IPR029063 -
Trme1379667g00001 43 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 43 IPR002935 GO:0008171
Trme1379667g00001 43 Gene3D Vaccinia Virus protein VP39 1 43 IPR029063 -
Trme1379667g00001 43 PANTHER O-METHYLTRANSFERASE-RELATED 1 43 - -
Trme1379667g00001 43 Pfam O-methyltransferase 1 43 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1379667g00001 Trme-Chr1379667 1 129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1379667g00001 1 43 Monolignol Biosynthesis Gene Families AT4G34050 93.023 1.99e-23 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1379667g00001 K00588 - rcu:8289465 85.1149