Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13787g00001 ACAAACTGTGAGATCCAAGAGTACAAGATCATAATATCCTTAAGGAGTAAGGACTTAGTCATGTATAAACCATTTGTGACATGTGATGATCCAAAAGGAGTTGTTGAGTGTGGAAGTATAAGAAGGTATAAGTCAAATTCTCACAAAATGAAGGACAAGACAAAGAGTCGAAAGACGGCCGAAAATTTAGAGACAAACAAACAAGACAAAGAAGAGAAAGTGTCATCAAAAGGTTCGACGGAAAGAGGTTTTGATCCATCTTCTTTGCAGCTTGTGAAGGTGTCTAGAGGTGCCGAGAAGTTGAACAACATGATTGAGTCATGGTCTAGAGGTTTGAGGTATGGTGCAAAATCNNNGTATGGTGCAAAATCCGAAGATATTGCAAAGGATTTGTTAAAAGGTGCTCTTGATTTGCAAGAATCTCTTGAGATGCTTCAAAAGGTGCAAGAAGTTTCGAATAATATGGCTCGATCGAAGAGGAAACAAGACGAGGAACGTGAAAGATGTAGAATTGATGCAAAGGTGAATGATGGAATTAGAACAATGCATTCCAATCATTTTGTTGAACACAATTCCGCTTATGGTTCTTCGAGTAGTTGTAGAGAGGAACTTAAGAAAGTGATTAAGGAGAGTTTGGTTAGACAGAATCTATTCCAAAGTACAAGCACTTCTGAAGGATTAGATTCAGCTTCTGCAGCATTCCCTTCTACAAGCTCAAGTCAATCTTCTGTTGTTTGGTATGACAAACTTTCCGATTCTTCATTGTCGCCGAATTTTCCAAGGAAGGAAAAAAGTACCAATCTTGTTGCAAAGTTGATGGGATTAGAACAAGTCCCTTCAAGAACATTTCCATCTGTTATGCAAAAACAGTTGGAGAATCAAAAGATTGTGAATCAAAAGAGACCTGTATTCGAGATTGACACGCCGAAGGCAAGAAAGAATAGTTCATTTGTTGAGAGGGCTAATATCGAGAAACAAAAGACTCTGAGGGAAATTCTTGAAACTACTCATTACAATGGATTGTTGAAGAATAGTCCTATTAGA 1044 0.3784 TNCEIQEYKIIISLRSKDLVMYKPFVTCDDPKGVVECGSIRRYKSNSHKMKDKTKSRKTAENLETNKQDKEEKVSSKGSTERGFDPSSLQLVKVSRGAEKLNNMIESWSRGLRYGAKSXYGAKSEDIAKDLLKGALDLQESLEMLQKVQEVSNNMARSKRKQDEERERCRIDAKVNDGIRTMHSNHFVEHNSAYGSSSSCREELKKVIKESLVRQNLFQSTSTSEGLDSASAAFPSTSSSQSSVVWYDKLSDSSLSPNFPRKEKSTNLVAKLMGLEQVPSRTFPSVMQKQLENQKIVNQKRPVFEIDTPKARKNSSFVERANIEKQKTLREILETTHYNGLLKNSPIR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13787g00001 348 MobiDBLite consensus disorder prediction 46 88 - -
Trme13787g00001 348 Coils Coil 148 168 - -
Trme13787g00001 348 PANTHER OS01G0228800 PROTEIN-RELATED 15 345 - -
Trme13787g00001 348 Coils Coil 53 73 - -
Trme13787g00001 348 MobiDBLite consensus disorder prediction 54 79 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13787g00001 21 225 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 40.385 8.52e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13787g00001 - - gmx:102663636 395.201