Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13785g00001 ATGTCTATGATCAAAGAAGATGAATGGTTTAAGCAGGGTTATAATCCTGCAAATCTAGACGATGAGGAAGAGGATGTTTACATTGATGATGAAGCCTTTTCCATCCAAGAAGTGTGCCTTGAGGCGGACCAGGGTAGTCCAAAATCACCAACACTAATCAATGCATTTCAGTTGATAGGGATGTCTTCATGTTTAGATCTCTCCGGCTTTTTTGAGAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACTTCGAACTATTCACGGAAAGATTTGACAGAGAAAATTGAGGACATTGTAATAGAAATGGGATTTAGAGTTCAGAAGAAAAATGGAAAATTGAAAGTGATACTCGAGAATAAAGCTCATAAAAGTCTCGGAAGCTTCTCAGTGGTAGCCGAG 402 0.3881 MSMIKEDEWFKQGYNPANLDDEEEDVYIDDEAFSIQEVCLEADQGSPKSPTLINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNYSRKDLTEKIEDIVIEMGFRVQKKNGKLKVILENKAHKSLGSFSVVAE 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13785g00001 134 Gene3D Kinase associated domain 1, KA1 48 134 - -
Trme13785g00001 134 ProSiteProfiles NAF domain profile. 48 72 IPR018451 GO:0007165
Trme13785g00001 134 CDD CIPK_C 54 134 - -
Trme13785g00001 134 Pfam NAF domain 50 109 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13785g00001 Trme-Chr13785 93 1204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13785g00001 1 134 CBL-interacting serine-threonine protein kinases AT1G48260 52.985 3.56e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13785g00001 K07198 - qsa:O6P43_003749 202.601