Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137834g00001 ATGCTTGGTCTGCTTCTACGAACCGAGCTGAATTCCACCCAACGGGACTACGCTCAGACAGCTCAAGCATGTGGGAAGGCTCTGATAGCATTAATAAATGAAGTGCTTGACCGAGCTAAAATTGAAGCTGGCAAATTAGAGCTGGAAGCGGTTCCGTTTGACCTTCGATCGATACTCGATGATGTCCTCTCTCTTTTTTCTGAGAAGTCTAGACACAAAGGTTTAGAGCTGGCGGTGTTTGTTTCTGATAAAGTTCCTGATATTGTTATGGGAGATCCTGGGAGATTCAGACAAATAGTAACAAATCTTGTTGGCAACTCTGTTAAAGTAAGTGGAATATTTCAAAATTTATTTGCCTAG 360 0.4222 MLGLLLRTELNSTQRDYAQTAQACGKALIALINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIVTNLVGNSVKVSGIFQNLFA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137834g00001 119 PANTHER TWO-COMPONENT HISTIDINE KINASE 1 109 - -
Trme137834g00001 119 Gene3D - 45 113 IPR036890 -
Trme137834g00001 119 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 33 111 IPR036890 -
Trme137834g00001 119 Coils Coil 29 49 - -
Trme137834g00001 119 Gene3D - 1 44 - -
Trme137834g00001 119 ProSiteProfiles Histidine kinase domain profile. 1 119 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137834g00001 Trme-Chr137834 41 530 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137834g00001 1 111 Histidine Kinase Gene Family AT2G01830 83.784 6.70e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137834g00001 K14489 - gmx:100818481 203.756