Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13778g00001 GCACATACATTTGGGAAAGCACGTTGCCGTTTCATCACGAATCGATTATATAACTTCAACAATACTGGCCAACCCGATCCAACTCTTAATACAGCATACTTACAAGAATTGCAAATACAATGTCCTCAAAATGGATCCGGTGATATCCGTGTCGCATTTGACCCAGTTACTCCTGGTAGATTGGACAAGCAATTCTACAACAATCTTCAAGTTAAAAAGGGTTTACTGCAAAGTGACCAAGAATTGTTCTCAACACCAGGTGCAGATACCATTAGCCTTGTCAATTGTTTTGCCAATAACGAATCATTTTTCTTTGAGCACTTCACGAAATCAATTATTAAAATGGGTAATATTGGTGTGCTTACGGGAACGCAAGGAGAAATTAGAAAACAATGTAATTTTGTTAACAAGAAATCTTCTCAATTGGATATTGCCATAGAATTATTAGAGGATGATGATATGGTTAGTTCAATCTAA 477 0.3648 AHTFGKARCRFITNRLYNFNNTGQPDPTLNTAYLQELQIQCPQNGSGDIRVAFDPVTPGRLDKQFYNNLQVKKGLLQSDQELFSTPGADTISLVNCFANNESFFFEHFTKSIIKMGNIGVLTGTQGEIRKQCNFVNKKSSQLDIAIELLEDDDMVSSI 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13778g00001 158 FunFam Peroxidase 1 115 - -
Trme13778g00001 158 Gene3D - 116 136 - -
Trme13778g00001 158 ProSiteProfiles Plant heme peroxidase family profile. 1 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme13778g00001 158 SUPERFAMILY Heme-dependent peroxidases 1 136 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme13778g00001 158 Pfam Peroxidase 1 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme13778g00001 158 PANTHER - 1 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme13778g00001 158 Gene3D Peroxidase, domain 2 1 115 - -
Trme13778g00001 158 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme13778g00001 158 PRINTS Plant peroxidase signature 52 67 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme13778g00001 158 PRINTS Plant peroxidase signature 68 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13778g00001 Trme-Chr13778 199 675 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13778g00001 1 158 Peroxidase AT2G38380 56.604 1.59e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13778g00001 K00430 - gmx:112997600 205.297