Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137771g00001 ACAATCATCATCATCATCGTAATCCTCGGTTTCCTCTTCTGGCTAATCGTTCGACCTAACGTCGTCAATTTCACCGTCACTGATGCATCTCTTACTCAATTCAATTTCACAAACAACAACACACTTCACTACGATCTCGCCGTTAACATCACGATCCGAAACCCTAATCGAAGAGTTGGTATCTATTACGATAACATCGAAACGCTTGCGTTTTATAAAGATGTTAGGTTTGGTTCACAAACTTTAGGTCAATTCTTTCAGCATCATAAGAATACGAGTTTCTTGAACCCTAATTTTAAAGGTCAACAAGTTGTTCCTTTGAGTTCAGATCAGMTTTCGRAGTTTGAKAAAGAAAAGAAAGATGGGGTTTTTGATATTGATGTGAAGCTTTTGCTTAATGTKAGGTTTAAATTGGGTTTGTTTAAGAGTGGGAAAGCGAAACCTAAGGTTCATTGTGATTTGAAGATTCCTCTGAAATCAGGCAATGGAACATTGTTGG 499 0.3727 TIIIIIVILGFLFWLIVRPNVVNFTVTDASLTQFNFTNNNTLHYDLAVNITIRNPNRRVGIYYDNIETLAFYKDVRFGSQTLGQFFQHHKNTSFLNPNFKGQQVVPLSSDQJSXFXKEKKDGVFDIDVKLLLNVRFKLGLFKSGKAKPKVHCDLKIPLKSGNGTLL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137771g00001 166 PANTHER OS05G0367900 PROTEIN 3 159 IPR044839 GO:0098542
Trme137771g00001 166 Pfam Late embryogenesis abundant protein 49 150 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137771g00001 Trme-Chr137771 79 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137771g00001 16 163 SNARE and Associated Proteins AT1G32270 39.865 1.80e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137771g00001 - - vvo:131642984 235.343