Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137636g00001 CGATCATGTTACCGGAAACTCGCCCTCCAACGCCACCCAGACAAGCTCGTCAAATCAGGCCTATCTCAATCCGAAGCCACCGCTCAATTTCAGGAGCTACAACATGCTTACGAGGTTCTCTCCGATCCAAAAGAACGCGCTTGGTACGATTCTCACCGTTCTCAAATCCTCTTCTCCGATCCAAATTCTCATTCTAATTCCGTTGTACCTGACCTTTTCTCGTTTTTCTCAAACACTGTGTTTTCTGGTTATTCCGATTCCGGTAAGGGTTTTTACAAGGTTTATTGTGATGTGTTTGATAAAATTCAGGCGAATGAGATTAATTTTGCTAAGAAATTAGGTATTGGAATTGATTCTGTTAAACAAGCTCCTCTTATGGGGAATTTGGATAGTCCTTATGCTCAGGTTACCGCTTTTTATAGTTATTGGTTGGGATTTTCGACGGTTATGGATTTTTGTTGGGTGGATGAGTATGATGCGATGGCTGGTCCGAATAGGAAATCGCGGAGGTTGATGGAGGAAGAGAATAATAAGGTGAGGAGGAAGGCTAAGAGGGAGTATAATGATACT 570 0.4263 RSCYRKLALQRHPDKLVKSGLSQSEATAQFQELQHAYEVLSDPKERAWYDSHRSQILFSDPNSHSNSVVPDLFSFFSNTVFSGYSDSGKGFYKVYCDVFDKIQANEINFAKKLGIGIDSVKQAPLMGNLDSPYAQVTAFYSYWLGFSTVMDFCWVDEYDAMAGPNRKSRRLMEEENNKVRRKAKREYNDT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137636g00001 190 CDD DnaJ 1 42 IPR001623 -
Trme137636g00001 190 ProSitePatterns Nt-dnaJ domain signature. 30 49 IPR018253 -
Trme137636g00001 190 SMART dnaj_3 1 45 IPR001623 -
Trme137636g00001 190 SUPERFAMILY Chaperone J-domain 2 83 IPR036869 -
Trme137636g00001 190 Gene3D DnaJ domain 1 107 IPR036869 -
Trme137636g00001 190 Pfam DnaJ domain 2 50 IPR001623 -
Trme137636g00001 190 PRINTS DnaJ domain signature 4 19 IPR001623 -
Trme137636g00001 190 PRINTS DnaJ domain signature 25 45 IPR001623 -
Trme137636g00001 190 PANTHER DNAJ PROTEIN JJJ1 HOMOLOG 1 190 IPR044648 -
Trme137636g00001 190 ProSiteProfiles dnaJ domain profile. 1 53 IPR001623 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137636g00001 1 190 C2H2 Transcription Factor Family AT1G74250 75.897 1.69e-105 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137636g00001 K09506 - gmx:100788305 356.681