Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137634g00001 ATGTTTCATATATACGGTTTATCGCTTTTTGCTGCTGGATTACTGTCATTGGGTTCTACGATCGTTGTAATGAGGAAATTTGATATTGATGAGGTTGTTAGGGTGATTGACAAATATAATGTTACACACTTTCCTGTTGTTCCACCGATGGTGTCGGCATTGACAGCGAAGGCAAAGGGGGTTAATGGAAGTAAGTTGAAGAGTTTGAGACAGGTCTCCTGCGGTGCAGCGCCGTTGAGCGCAGGAGTTATTAATGGTTTTGTCCGTGCTTTCCCCAATGTCGATTTTATACAG 294 0.4286 MFHIYGLSLFAAGLLSLGSTIVVMRKFDIDEVVRVIDKYNVTHFPVVPPMVSALTAKAKGVNGSKLKSLRQVSCGAAPLSAGVINGFVRAFPNVDFIQ 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137634g00001 98 SUPERFAMILY Acetyl-CoA synthetase-like 1 97 - -
Trme137634g00001 98 Pfam AMP-binding enzyme 1 93 IPR000873 -
Trme137634g00001 98 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 94 - -
Trme137634g00001 98 Gene3D - 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137634g00001 Trme-Chr137634 190 483 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137634g00001 3 98 Monolignol Biosynthesis Gene Families AT4G19010 65.625 9.75e-38 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137634g00001 K01904 - gmx:100804808 155.992