Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137567g00001 GAGGTCTTCTGTCCAGGAACCGTTTCTTGTGCAGACATAATTGCTTTAGCAGCTAGAGATGCAGTTGAAATTGCCGGTGGACCAAGGATTCGGATTCCTCTAGGTAGGAGAGACGGAATGGTTTCAATTGCTTCAAATGTTAGACCCAACATTGTGGACACTAGTTTTACTATGGATGAGATGGTTAAGCTCTTTGCTAATAAAGGATTGTCCTTACTTGATCTTGTCATTCTTTCAG 238 0.4202 EVFCPGTVSCADIIALAARDAVEIAGGPRIRIPLGRRDGMVSIASNVRPNIVDTSFTMDEMVKLFANKGLSLLDLVILS 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137567g00001 79 ProSiteProfiles Plant heme peroxidase family profile. 1 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 Pfam Peroxidase 4 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 Gene3D - 3 51 - -
Trme137567g00001 79 Gene3D Peroxidase, domain 2 52 79 - -
Trme137567g00001 79 PRINTS Plant peroxidase signature 7 17 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 PRINTS Plant peroxidase signature 73 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 PRINTS Plant peroxidase signature 26 41 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 PANTHER PEROXIDASE 25-RELATED 3 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 SUPERFAMILY Heme-dependent peroxidases 1 79 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 PRINTS Haem peroxidase superfamily signature 8 25 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 PRINTS Haem peroxidase superfamily signature 26 38 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme137567g00001 79 PRINTS Haem peroxidase superfamily signature 74 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137567g00001 Trme-Chr137567 244 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137567g00001 1 79 Peroxidase AT2G24800 69.620 3.45e-36 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137567g00001 K00430 K18328 gmx:102664900 137.502