Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137530g00001 ATGGTGTTGGCAGGGACAGACACAATTTCTTCTGCAGTGGTTTGGGCTATGACTGCACTAATGCAGAATCCAAGAGTGATGCAGAAAGTACAAGAAGAGATTCGCAAAGTGTATGAAGGGAAGAGTTTTATAGAGGAAGAAGATGTCCAAAAGCTTCCATATCTCAAGGCAGTTATAAAAGAAACAATGAGATTGTACCCATCATTGCCGATACTTTTGCCAAGAGAAACGATGAAAAAGTGCGAAATTGAAGGGTATGAAATTCCAGAGAAGACATTGGTGTTCGTGAATGCTTGGGCGATCCATAGAGACCCAGAAGCATATGAGAATCCAGAAGAGTTTTATCCAGAGAGATTTGTAGACAGTGATATAGATTTTAAAGGACAAGATTTTGAGCTAGTTCCATTTGGTTCAGGGCGAAGAGTTTGCCCCGGCTTGAACATGGCTGTTGCTACTGTGGATCTAATACTTGCTAATCTTCTCTATTTGTTTGATTGGGAAATGCCCGAAGGAGTAAAGAAGGAAGATATAGACATTGAG 540 0.4074 MVLAGTDTISSAVVWAMTALMQNPRVMQKVQEEIRKVYEGKSFIEEEDVQKLPYLKAVIKETMRLYPSLPILLPRETMKKCEIEGYEIPEKTLVFVNAWAIHRDPEAYENPEEFYPERFVDSDIDFKGQDFELVPFGSGRRVCPGLNMAVATVDLILANLLYLFDWEMPEGVKKEDIDIE 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137530g00001 180 PRINTS E-class P450 group I signature 143 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS E-class P450 group I signature 133 143 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS P450 superfamily signature 134 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS P450 superfamily signature 143 154 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 SUPERFAMILY Cytochrome P450 1 173 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 FunFam Predicted protein 2 180 - -
Trme137530g00001 180 PANTHER CYTOCHROME P450 71B11-RELATED 1 179 - -
Trme137530g00001 180 Pfam Cytochrome P450 1 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme137530g00001 180 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 136 145 IPR017972 GO:0005506|GO:0016705
Trme137530g00001 180 Gene3D Cytochrome P450 1 179 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137530g00001 Trme-Chr137530 38 577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137530g00001 1 180 Cytochrome P450 AT3G26210 58.564 2.85e-76 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137530g00001 - - gmx:100803017 293.123