Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1374602g00001 TTCCGAGATGATGAGAGTGGTTCGAGATCAAGGAATGATGTGTTGCCTGCTAATGCTAACAGTGATCAAGTTGAGGCAGAATGGATAGAACAGTATGAACCTGGTGTCTATATAACTCTGGTTGCGATGCGTGACGGAACAAGAGATTTGAAGAGAGTGCGCTTCAGGTAA 171 0.4444 FRDDESGSRSRNDVLPANANSDQVEAEWIEQYEPGVYITLVAMRDGTRDLKRVRFR 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1374602g00001 56 PANTHER PROTEIN BREVIS RADIX-LIKE 1 6 55 IPR044532 -
Trme1374602g00001 56 MobiDBLite consensus disorder prediction 1 20 - -
Trme1374602g00001 56 Pfam Transcription factor regulating root and shoot growth via Pin3 25 55 IPR013591 -
Trme1374602g00001 56 ProSiteProfiles BRX domain profile. 26 56 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1374602g00001 Trme-Chr1374602 1 171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1374602g00001 10 55 Major Intrinsic Protein MIP AT1G31880 54.348 2.79e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1374602g00001 - - gmx:100811999 94.7449