Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme137427g00001 | AAGAACGATTCACGGAAACTGTTTCAGCGTCTCTGGACTGACGAAGATGAGATCGTAATCTTGCAAGGGTTTCTCGATTACAACGCGAATCGTGGATCGTCTTATCATAATGATACTGGTTCGTTTTACGATCAAATTAAGTCCAAGATTCAACTCGATTTCAACAAGAGCCAGCTTGTTGATAAACTCCGAAGGTTGAAGAAAAAGTATCGCAACGTTCTTCAGAAATTTGATTCTGCTCATATGACAACACCGGTGAAGAATGAGCTGATTACTGAGAAGAAAACCGCATCACGAAAGCGGTCACGAACAACAACGGACGAGAAGCGTGAATTGAATGATTCTTTAGGCTTGAATAAGGATAATCATAATAATTCTGCTAATAACAATAGTAGCAATGTTGATGATGAAAATGGTGATAAAAGTAA | 428 | 0.3855 | KNDSRKLFQRLWTDEDEIVILQGFLDYNANRGSSYHNDTGSFYDQIKSKIQLDFNKSQLVDKLRRLKKKYRNVLQKFDSAHMTTPVKNELITEKKTASRKRSRTTTDEKRELNDSLGLNKDNHNNSANNNSSNVDDENGDKS | 142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme137427g00001 | 142 | Pfam | Protein of unknown function, DUF573 | 8 | 80 | IPR007592 | GO:0006355 | |
Trme137427g00001 | 142 | PANTHER | BNAANNG10740D PROTEIN-RELATED | 6 | 87 | IPR007592 | GO:0006355 | |
Trme137427g00001 | 142 | MobiDBLite | consensus disorder prediction | 77 | 91 | - | - | |
Trme137427g00001 | 142 | MobiDBLite | consensus disorder prediction | 118 | 135 | - | - | |
Trme137427g00001 | 142 | MobiDBLite | consensus disorder prediction | 77 | 142 | - | - | |
Trme137427g00001 | 142 | MobiDBLite | consensus disorder prediction | 92 | 117 | - | - | |
Trme137427g00001 | 142 | Coils | Coil | 56 | 76 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme137427g00001 | Trme-Chr137427 | 1 | 578 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme137427g00001 | 2 | 80 | GeBP Transcription Factor Family | AT3G04930 | 71.605 | 4.84e-34 | 120 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GeBP | Trme137427g00001 | DUF573 | 7e-25 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme137427g00001 | - | - | psat:127097903 | 162.54 |