Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137257g00001 ATGAATGAATATGAACACACGTTTATTGGAAATATAGTTCAAGCTGTTTCCAATAAGATCAATCGAGCTCCTTTACATGTTGTTGATTACCCTGTTGGACTCGAGTCTCGAATATGTAAAGTAAACTCACTTTTGAATAAGACTTGTAATGATGGAGTTTGCATGATTGGCATTCATGGAACAGGAGGAATTGTAAAACATGGTTTGGAACATCTCCAAGAGCAGCTCCTTTACAAAACAATTAGATTGGAAATGAAGATAGGTGGTGTCAATGAAGGAATTGAAATCATTAAAGAAAGGCTATGTCAAAAGAAGGTCTTGTTGATACTCGATGACGTTGACGAGTTGAAGCAGCTAAAATTTTTAGCTGGAAGATTTGATTGGTTTGGTCCTAACAGCAGAGTCATCATTACCACTCGAGACAAAA 427 0.3653 MNEYEHTFIGNIVQAVSNKINRAPLHVVDYPVGLESRICKVNSLLNKTCNDGVCMIGIHGTGGIVKHGLEHLQEQLLYKTIRLEMKIGGVNEGIEIIKERLCQKKVLLILDDVDELKQLKFLAGRFDWFGPNSRVIITTRDK 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137257g00001 142 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 69 142 IPR044974 GO:0006952
Trme137257g00001 142 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 141 IPR027417 -
Trme137257g00001 142 Gene3D - 65 142 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137257g00001 Trme-Chr137257 29 545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137257g00001 32 142 WRKY Transcription Factor Family AT5G45050 28.261 1.57e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137257g00001 - - tpra:123914850 231.491