Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137229g00001 ATGATTTGGGATCTTCATCTTCCAGAGGAGCCAACTAGAGGATTGTTTCGGTTAACTCGGTTGGATATTGAAAAGCTTAAGGAATTTGTAGTGTCCAAACAAAAGGGTAGGAATGAAAATAAGAAACTTCATTTGTCAACTTTTGTGGTATCTATTGCATATGCATGGGTATGCAGAGTCAAAGCAGAGGAAATTGAGAACAAAAATGTTATGCTGGCTGTGAATATCGATTGCAGGAATCGGTTGGATCAACCAGTTCCTGCAACATATTTTGGAAATTGTATTGGAGCAAGAATGGCAATAGTTGAAACAA 313 0.377 MIWDLHLPEEPTRGLFRLTRLDIEKLKEFVVSKQKGRNENKKLHLSTFVVSIAYAWVCRVKAEEIENKNVMLAVNIDCRNRLDQPVPATYFGNCIGARMAIVET 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137229g00001 104 Pfam Transferase family 19 95 - -
Trme137229g00001 104 Gene3D - 7 104 IPR023213 -
Trme137229g00001 104 PANTHER - 11 99 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137229g00001 8 95 Monolignol Biosynthesis Gene Families AT5G48930 29.213 4.35e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137229g00001 - - mtr:11418791 166.777