Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme137181g00001 | ATGCTTGAAAGTTTGATTCGCCTAGCTCAAGCTCATGCAAGGCTGATGTTCAGAAATGAGGTGACTCGTCTAGATGCCATCACAGCTATTTTATGCATAGAATCCTCCATGACTACCTCAGCTATTGTGGATTGCATTGGGAATGCTCTGCATTCCAATTTCACCGACAACCCTGATCAGGAATGTATCCTTGCTGTCTTTCTTTGCATAAAATGTAGTTTTGCATAA | 228 | 0.4167 | MLESLIRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFTDNPDQECILAVFLCIKCSFA | 75 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme137181g00001 | 75 | Gene3D | - | 1 | 43 | IPR027417 | - | |
| Trme137181g00001 | 75 | Pfam | MCM AAA-lid domain | 2 | 37 | IPR041562 | - | |
| Trme137181g00001 | 75 | PANTHER | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER | 1 | 43 | IPR031327 | GO:0003677|GO:0005524|GO:0032508 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme137181g00001 | 1 | 64 | Core DNA Replication Machinery Family | AT2G14050 | 90.625 | 4.68e-35 | 122 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trme137181g00001 | K10738 | - | gmx:100776255 | 122.094 |