Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137172g00001 ATGGATGTGAGCAACTCCAAGTATCTTACAGAGACTCCAAAGTTTTTTTGGACCCCAAAACTTGAGCGGCTAGATTTTACTGGATGCACAAACTTAACACAGGTCCATCCATCAATTGGACATCTTACAAAACTTGTCTTCTTAAGTTTTCAAAACTGCAGCAGTTTGGTCAACCTCGATTTTGGTAGTGTATCAAATTTAAATTCTTTGCGAGTTCTACGCCTCTCTGGTTGCACAAAACTTCAAAAGACGCCAGAATTTACAGGGGCATCAAATCTTGAGTACCTTGAGATGGATGGATGCTTAAGTTTAACCACAGTCCATGAATCCATTGGGGTTCTTGCAAAGCTTAGATTCTTGAGTTTGAGGGATTGCATCATGGTAGTCAAGATCGCGAGTCAAAAC 405 0.4049 MDVSNSKYLTETPKFFWTPKLERLDFTGCTNLTQVHPSIGHLTKLVFLSFQNCSSLVNLDFGSVSNLNSLRVLRLSGCTKLQKTPEFTGASNLEYLEMDGCLSLTTVHESIGVLAKLRFLSLRDCIMVVKIASQN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137172g00001 135 SUPERFAMILY L domain-like 2 131 - -
Trme137172g00001 135 Gene3D Ribonuclease Inhibitor 1 134 IPR032675 -
Trme137172g00001 135 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137172g00001 Trme-Chr137172 34 438 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137172g00001 65 133 WRKY Transcription Factor Family AT4G12020 40.580 3.83e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137172g00001 - - vvo:131596835 199.519