Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137168g00001 ATGACCACTGCAAAACCAGTGAAAGGTACTTCTGATGATTTGGTGGGTGAGTTTGCTTATGGTTCTGGGAATATCAATCCAGAAAAAGCCATTAACCCAGGACTTGTTTATGACATCACCAAGGAAGATTATGTACAAATGCTTTGTAATTTTGGGTATGATGCTAATAAAATTAAACAGATTAGTGGAGATAGCTCAAGTTGCGATGGAGATTCAAAAAGAGACTTGGTGAAAGATATAAACTATCCAGCAATGGGGATTCCTGTTAGGCCTTATCATAATCATTTTCATGTCAAAATTCATAGAACTGTCACAAATGTTGGTTTTCCAAACTCAACCTACAAGGCTACTCTCATCCATCATAATCCAAAATTCAAGATTATCGTGAAACCAAAATTGCTCTCATTTAGATCATTAAATGAGAAACAATCATTTGTTATCACTGTTGTTGGAGGAGCAAAATTAAATCAAACTGTATTTTCCTCATCACTTACATGGTCTGATGGTACCCACAATGTCAAGAGTCCCATTGTTGTGCATATACTT 546 0.3571 MTTAKPVKGTSDDLVGEFAYGSGNINPEKAINPGLVYDITKEDYVQMLCNFGYDANKIKQISGDSSSCDGDSKRDLVKDINYPAMGIPVRPYHNHFHVKIHRTVTNVGFPNSTYKATLIHHNPKFKIIVKPKLLSFRSLNEKQSFVITVVGGAKLNQTVFSSSLTWSDGTHNVKSPIVVHIL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137168g00001 182 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 179 IPR045051 -
Trme137168g00001 182 Gene3D Peptidase S8/S53 domain 1 44 IPR036852 GO:0004252|GO:0006508
Trme137168g00001 182 Pfam Fibronectin type-III domain 79 179 IPR041469 -
Trme137168g00001 182 Gene3D - 48 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137168g00001 Trme-Chr137168 1 546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137168g00001 1 182 Subtilisin-like Serine Gene Family AT5G59090 45.652 9.38e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137168g00001 - - mtr:11439741 259.225