Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137110g00001 TCGGTCAGCGGTGATCCGATTCAGAGGTTAAGTGCTTACATGTTGGAAGGTTTAAGAGCAAGGTTGGAATCATCAGGGAGTGTAATTTATAAAGCACTGAAGTGTGACGAACCGACGAGCAACGAATTAATGAATTCTATGCAAATATTGTATCATGCTTGCCCGTATTTTAAGTTTGCTTACATATCTTCCAATGTTKTCATTTGTGAAGCATTGSAAAATGAGTCAAGAATTCACATAATTGACTTCCAAATTGCACAAGGGACACAATGGTTGTCACTTTTGCAGGCTCTTACGCGTAGACCAGGCGGACCTCCGTTCGTTCGTGTAACAGGTATCGATGATTCACAATCGTTTCATGCTAGAGGTGGAGGACTTCATATTGTAGGAAAAAAGCTAGCAGATTATGCTAAAACTTGTGGAGTTCCATTTGAGTTTCATAGTGTTGCAATGTTTGGAAGTGATGTTCAATTGGAAGATCTTGTAGTTCAAAATGGTGAAGCTCTTGCTGTGAATTTTCCTTTTGCTTTGCATCACATGCCGGATGAGAGCGTGAGCACGGAGAATCATAGAGACC 577 0.4073 SVSGDPIQRLSAYMLEGLRARLESSGSVIYKALKCDEPTSNELMNSMQILYHACPYFKFAYISSNVXICEALZNESRIHIIDFQIAQGTQWLSLLQALTRRPGGPPFVRVTGIDDSQSFHARGGGLHIVGKKLADYAKTCGVPFEFHSVAMFGSDVQLEDLVVQNGEALAVNFPFALHHMPDESVSTENHRD 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137110g00001 192 Pfam GRAS domain family 1 192 IPR005202 -
Trme137110g00001 192 ProSiteProfiles GRAS family profile. 1 192 IPR005202 -
Trme137110g00001 192 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 185 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137110g00001 Trme-Chr137110 3 579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137110g00001 1 192 GRAS Transcription Factor Family AT4G17230 65.625 1.11e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme137110g00001 GRAS 6.7e-61 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137110g00001 - - gmx:100819190 322.013