Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme137057g00001 GTCAAAGTTGGTTGCTGCACTTTGGATGTTCTCAAGCAGATCAGTGGGGAGGAGATATCACGAATTGCAGCAGATGGAAAACCTATTGATCGTTTGAGTAGACTTGCAAACCATATTCTTAACCAACAGAGTTTCTATCCACTTTACCCKCCRGCAGAAAGTGTTCCCTTGGACTTTTCTCTGGCRCCAGAARCCCTTCAACTCTCATYGGTTCCAGATSTTCTTATCTTACCTTCAGACATCAAGTACTTTGTCAAGGTAAAATTTTTGGTTTAA 276 0.4058 VKVGCCTLDVLKQISGEEISRIAADGKPIDRLSRLANHILNQQSFYPLYPPAESVPLDFSLAPEXLQLSXVPDXLILPSDIKYFVKVKFLV 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme137057g00001 91 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 87 IPR016722 -
Trme137057g00001 91 Gene3D - 25 88 - -
Trme137057g00001 91 Pfam DNA polymerase alpha/epsilon subunit B 1 86 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme137057g00001 Trme-Chr137057 77 427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme137057g00001 1 87 Core DNA Replication Machinery Family AT1G67630 65.517 1.14e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme137057g00001 K02321 - gmx:100797769 163.696