Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13681g00001 TGGCTTTGCAGGCAATTATTCTTGTGTGTCGCTGTTGGTCTTTGGGCAGGGCTCATTATTGGATTTGTTACTGAATACTATACCAGCAATGCATACAGTCCCGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATCATTCCAATTTTTGCCATTGCAGTTAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTACGGTGTTGCTGTTGCTGCACTTGGAATGTTGAGTACCATCGCCACCGGATTAGCCATCGATGCATACGGTCCAATCAGTGACAATGCCGGAGGTATTGCTGAGATGGCTGGAATGAGTCACAGAATTCGTGAGAGAACCGATGCCCTTGATGCTGCAGGAAACACAACTGCCGCCATTGGAAAGGGGTTTGCTATTGGTTCTGCCGCTCTTGTGTCTCTTGCCCTCTTCGGTGCCTTTGTGAGCCGAGCTGGTATTACTACAGTTGATGTGCTAACCCCCAAGGTTTTCATTGGTTTGCTTGTGGGTTCCATGCTCCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCAGCCCTTAAGATGGTTGAGGAAGTACGCAGGCAATTCAACACCATTCCTGGCTTGATGGAGGGAACTGCCAAGCCTGACTATGCAACATGTGTTACTATCTCCACCGACGCATCTATCAAAGAAATGATCCCACCTGGTGCCCTTATTGCCATCTCTGCATCAAACACTGGCGGTGCTTGGGATAACGCCAAGAAGTACATTGAGGCTGGTGCCTCRGAGCATGCAAGAAGCCTTGGTCCAAAGGGGTCAGATCCACACAAGGCAGCAGTTATTGGTGACACCATTGGGGACCCATTGAAGGATACATCCGGACCATCACTCAACATCCTTATCAAGCTGATGGCCGTCGAGTCTCTGGTGTTTGCTCCTTTCTTTGCAACCCACGGTGGTCTCCTCTTCAAAATTTGGTCATAG 1020 0.4843 WLCRQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLLVGSMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVTISTDASIKEMIPPGALIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIWS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13681g00001 339 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 5 250 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trme13681g00001 339 Pfam Inorganic H+ pyrophosphatase 248 323 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trme13681g00001 339 Pfam Inorganic H+ pyrophosphatase 5 251 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13681g00001 Trme-Chr13681 2 1531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13681g00001 5 231 Primary Pumps ATPases AT1G15690 97.797 5.25e-152 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13681g00001 K23025 - cit:102612154 626.706