Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme136783g00001 ATGGAAAATGGGAGTTTAGGTGATGTTTTGCATGAGGGGAAGTTTGAGGAATTGTTGGATTGGTCTAAGAGATTTGGAATTGCTTTAGGTGCTGCTAAAGGGTTGGCTTATTTACACCATGATTGTGTTCCTCCTATTGTTCATAGAGATGTTAAGAGTAATAACATCTTGCTTGATCATGATTTTGTGCCTCGTGTCGCTGATTTTGGACTTGCTAAGACGTTGCAGCGTGATGCAAGTGATGGTGCTATGTCTAGAGTTGCTGGTTCATATGGTTACATTGCTCCAGAATATGGTTATACATTGAAAGTGACTGAGAAGAGT 324 0.4012 MENGSLGDVLHEGKFEELLDWSKRFGIALGAAKGLAYLHHDCVPPIVHRDVKSNNILLDHDFVPRVADFGLAKTLQRDASDGAMSRVAGSYGYIAPEYGYTLKVTEKS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme136783g00001 108 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 108 - -
Trme136783g00001 108 FunFam Protein kinase superfamily protein 1 74 - -
Trme136783g00001 108 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Trme136783g00001 108 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
Trme136783g00001 108 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Trme136783g00001 108 Pfam Protein kinase domain 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme136783g00001 108 ProSiteProfiles Protein kinase domain profile. 1 108 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme136783g00001 Trme-Chr136783 1 531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme136783g00001 1 108 Receptor kinase-like Gene Family AT5G65710 72.174 9.50e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme136783g00001 Pkinase 4.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme136783g00001 - - tpra:123909546 216.853