Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme136775g00001 ATGTTGCAGGCTAGAGCTGGTATAGATTATGAGTCCTCGTTTGGTAAAGCACGCCCAAATGACACTATCTTGAAGCTTCAAAGGACAACACCTTATTACAAAAGAAACCGGGCACATATTTGCAGTTTCTACATAAGGGGTGAGTGTACTAGAGGAGCCGAGTGCCCTTACAGACACGAGATGCCAGTAACTGGGGAACTGTCTCAACAAAATATCAAAGATCGTTATTATGG 233 0.4335 MLQARAGIDYESSFGKARPNDTILKLQRTTPYYKRNRAHICSFYIRGECTRGAECPYRHEMPVTGELSQQNIKDRYYG 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme136775g00001 78 ProSiteProfiles Zinc finger C3H1-type profile. 35 62 IPR000571 GO:0046872
Trme136775g00001 78 Gene3D - 25 77 - -
Trme136775g00001 78 PANTHER PRE-MRNA-SPLICING FACTOR RBM22 3 78 IPR039171 GO:0003723
Trme136775g00001 78 SUPERFAMILY CCCH zinc finger 37 60 IPR036855 GO:0046872
Trme136775g00001 78 Pfam Torus domain 24 72 IPR032297 -
Trme136775g00001 78 SMART c3hfinal6 35 61 IPR000571 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trme136775g00001 Torus 2.5e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme136775g00001 K12872 - fve:101292690 161.77