Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme136454g00001 ATGGCATGTCCTCATGTTGCTCGTGTCGCAGCGCTTGTGAAAGGCGCACACCATAATTGGAGCCCTGCGGCTATTCGGTCGGCAATAATGACAACATCAGCCATATTGGATAATACAAAGGAACACATCAAAGACATTGGAACAGGCAGCAGAGCCACACCTTTTGCATTGGGAGCTGGTCATGTTAATCCTAATAGAGCACTTCACCCAGGTCTTGTTTATGATGTTGGTGTACAAGATTATGTTAATCTTCTATGTGCACTCAACTTCACACAGAAAAACATCGCTGCCATTACAAGATCTTCTTCCAATGATTGCTCTAAACCTTCATTGGATCTTAACTACCCTTCTTTTATTGCTTTTTTCAATGGTGAAAATTCTTCTTCAAAGACAATGCATGAATTTTATAGAACACTTACCAATGTTGGTGAGGGACAAGCAACTTATGTTGCTAGCATTACTCCAATTGAAGGGTTTCGTGTCACCGTTATCCCAAACAAGTTGGTGTTCAATGAGAAGAATGAGAAGTCAAACTACAAGTTGAAGATTCAAGTTGCAAGAATGAAAAA 569 0.4025 MACPHVARVAALVKGAHHNWSPAAIRSAIMTTSAILDNTKEHIKDIGTGSRATPFALGAGHVNPNRALHPGLVYDVGVQDYVNLLCALNFTQKNIAAITRSSSNDCSKPSLDLNYPSFIAFFNGENSSSKTMHEFYRTLTNVGEGQATYVASITPIEGFRVTVIPNKLVFNEKNEKSNYKLKIQVARMK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme136454g00001 189 Gene3D Peptidase S8/S53 domain 1 84 IPR036852 GO:0004252|GO:0006508
Trme136454g00001 189 Pfam Fibronectin type-III domain 112 186 IPR041469 -
Trme136454g00001 189 SUPERFAMILY Subtilisin-like 1 72 IPR036852 GO:0004252|GO:0006508
Trme136454g00001 189 Gene3D - 85 189 - -
Trme136454g00001 189 ProSiteProfiles Serine proteases, subtilase domain profile. 1 68 - -
Trme136454g00001 189 Pfam Subtilase family 1 41 IPR000209 GO:0006508|GO:0008236
Trme136454g00001 189 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 181 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme136454g00001 Trme-Chr136454 6 574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme136454g00001 1 187 Subtilisin-like Serine Gene Family AT5G67090 48.677 2.69e-50 171