Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13626g00001 ATGGTGGTTGATATGTGTAAGGGAGTTCAGTATCTAAATGAAATCAAGGATTCTGTGGTTGCTGGGTTCCAGTGGGCATCAAAAGAAGGTGTTTTGGCGGAGGAAAACATGAGAGGCATCTGCTTTGAAGTATGTGATGTTGTCCTGCACACTGATGCTATTCACAGAGGAGGWGGYCAGATCATTCCTACTGCTAGGAGAGTCTTCTATGCCTCACAGCTCACAGCCAAACCCAGGCTTCTGGAGCCTGTGTACATGGTTGAAATCCAAGCTCCTGAGCAAGCTCTTGGTGGTATCTATAGTGTTCTTAACCAGAAGCGTGGACATGTTTTTGAAGAAATGCAGAGGCCCGGTACCCCACTTTACAACATCAAAGCATACCTCCCTGTCGTTGAGTCCTTTGGATTTTCCAGTCAACTGAGGGCTGCAACATCTGGGCAGGCTTTCCCCCAGTGTGTCTTTGATCATTGGGATACGATGACCTCAGATCCTTTGGAGGCTGGATCACAAGCTGCAACGCTTATTACCGACATTCGCAAGAGGAAGGGTCTCAAGGAGCAGATGACTCCACTCTCTGAGTTTGAAGACAAGCTTTAA 597 0.474 MVVDMCKGVQYLNEIKDSVVAGFQWASKEGVLAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTARRVFYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVVESFGFSSQLRAATSGQAFPQCVFDHWDTMTSDPLEAGSQAATLITDIRKRKGLKEQMTPLSEFEDKL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13626g00001 198 CDD aeEF2_snRNP_like_IV 1 85 - -
Trme13626g00001 198 Gene3D - 1 77 IPR014721 -
Trme13626g00001 198 SUPERFAMILY Ribosomal protein S5 domain 2-like 2 81 IPR020568 -
Trme13626g00001 198 CDD eEF2_snRNP_like_C 82 160 - -
Trme13626g00001 198 SMART EFG_C_a 79 168 IPR000640 -
Trme13626g00001 198 SMART EFG_IV_2 1 77 IPR005517 GO:0005525
Trme13626g00001 198 Gene3D - 78 198 - -
Trme13626g00001 198 FunFam Translation elongation factor 2 78 198 - -
Trme13626g00001 198 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 197 - -
Trme13626g00001 198 Pfam Elongation factor G, domain IV 2 77 IPR005517 GO:0005525
Trme13626g00001 198 Pfam Elongation factor G C-terminus 79 166 IPR000640 -
Trme13626g00001 198 SUPERFAMILY EF-G C-terminal domain-like 82 193 IPR035647 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13626g00001 Trme-Chr13626 923 1519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13626g00001 1 198 Eukaryotic Initiation Factors Gene Family AT1G56070 91.919 2.40e-132 389