Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1362593g00001 GTTATCACTGTTCCTGCTCACTTCAACAACTCACAGAGACAAGCTACAAAAGATGCAGGGAAAGTTGCTGGTTTTAAAGTGATGAGGATCATCAATGAACCTACTGCAGCTGCTATTGCTTATGGTTTGGACAAGAAAAAGTGGAGAGAAGGTGAGAAGAATGTGCTTGTGTTTGATCTTGGTGGTGGAACTTTTGATGTTTCC 204 0.4167 VITVPAHFNNSQRQATKDAGKVAGFKVMRIINEPTAAAIAYGLDKKKWREGEKNVLVFDLGGGTFDVS 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1362593g00001 68 PANTHER HEAT SHOCK PROTEIN 70KDA 1 68 IPR013126 GO:0005524|GO:0140662
Trme1362593g00001 68 FunFam Endoplasmic reticulum chaperone BiP 1 59 - -
Trme1362593g00001 68 Pfam Hsp70 protein 1 68 IPR013126 GO:0005524|GO:0140662
Trme1362593g00001 68 SUPERFAMILY Actin-like ATPase domain 1 45 IPR043129 -
Trme1362593g00001 68 Gene3D - 1 52 - -
Trme1362593g00001 68 Gene3D - 53 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1362593g00001 Trme-Chr1362593 1 204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1362593g00001 1 68 Calmodulin-binding Proteins AT5G02500 82.353 1.45e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1362593g00001 K03283 - gmx:100788531 124.02