Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1358067g00001 ATGGACAAGAGTAGTATAGATGACGTTGTCCTTGTTGGTGGCTCTTCTAGGATTCCCAAAGTGAAACAGCTATTGCAGAACTTTTTCAACGGAAAGGAATTATGCAAGAGCATCAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCT 156 0.4359 MDKSSIDDVVLVGGSSRIPKVKQLLQNFFNGKELCKSINPDEAVAYGAAVQA 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1358067g00001 52 ProSitePatterns Heat shock hsp70 proteins family signature 3. 9 23 IPR018181 -
Trme1358067g00001 52 FunFam Chaperone protein DnaK 1 40 51 - -
Trme1358067g00001 52 PRINTS 70kDa heat shock protein signature 6 22 - -
Trme1358067g00001 52 PRINTS 70kDa heat shock protein signature 38 52 - -
Trme1358067g00001 52 Gene3D - 36 52 - -
Trme1358067g00001 52 PANTHER HEAT SHOCK PROTEIN 70KDA 1 52 IPR013126 GO:0005524|GO:0140662
Trme1358067g00001 52 SUPERFAMILY Actin-like ATPase domain 2 52 IPR043129 -
Trme1358067g00001 52 Pfam Hsp70 protein 1 52 IPR013126 GO:0005524|GO:0140662
Trme1358067g00001 52 Gene3D - 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1358067g00001 Trme-Chr1358067 1 156 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1358067g00001 1 52 Calmodulin-binding Proteins AT3G12580 90.385 7.86e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1358067g00001 K03283 - ppp:112288678 100.138