Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme135775g00001 GAAAATCTCGTGAGAGAGACTAAAGAGAAACCCGTATCGATGAATGCTTTTGAGCTTATTTCTAGATCTCAAAGCTTCAATCTTGACAATATGTTTGAGATGGAGCAAAAGGGGGTTGTAAAGCGCGAAACACATTTCGCTTCACAGCGCCCTGCAAATGAAATTATGTCTAAAATTGAGGAGGCTGCCAAACCTCTCGGATTTAATGTTCATAAGCGAGATTACAAGGTAACAAATTAA 240 0.3917 ENLVRETKEKPVSMNAFELISRSQSFNLDNMFEMEQKGVVKRETHFASQRPANEIMSKIEEAAKPLGFNVHKRDYKVTN 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme135775g00001 79 CDD CIPK_C 15 74 - -
Trme135775g00001 79 ProSiteProfiles NAF domain profile. 9 33 IPR018451 GO:0007165
Trme135775g00001 79 Gene3D Kinase associated domain 1, KA1 8 79 - -
Trme135775g00001 79 Pfam NAF domain 11 72 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme135775g00001 Trme-Chr135775 208 561 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme135775g00001 1 77 CBL-interacting serine-threonine protein kinases AT1G01140 67.532 1.24e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme135775g00001 - - gmx:100794136 132.109