Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13576g00001 ATGAATGGTTTGAGTCCTGAGGCTACAACATTTATTAATGCTTTACAACTGCAGATTCCACATTTAAGGCCCACAGAGTACAAGAGATCAAGGTTACCTAGAAACAGGAGGACTGTGAACCGTGCATATGGTGGAGTTTTATCTGGAGGTGCTGTTAGAGAAAGAATCATTCGAGCTTTCTTGGTTGAAGAACAAAAGATTGTCAAGAAAGTCTTGAAGATCCAAAAGACAAAGGAAAAACAAGCTTTGAAGGGCTGA 258 0.3992 MNGLSPEATTFINALQLQIPHLRPTEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQALKG 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13576g00001 85 PANTHER 60S RIBOSOMAL PROTEIN L34 16 81 IPR008195 GO:0003735|GO:0005840|GO:0006412
Trme13576g00001 85 Pfam Ribosomal protein L34e 19 61 IPR008195 GO:0003735|GO:0005840|GO:0006412
Trme13576g00001 85 Gene3D - 13 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13576g00001 Trme-Chr13576 479 839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13576g00001 19 84 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.909 2.92e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13576g00001 K02915 - gmx:100499882 109.768