Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme135729g00001 ATGTTTCCAACTAACAACTCTTCCTCTTCCTCCGACATGTCATTGTCGAATTCCGAGGGCTCTCATTGGATGCCAGTTGTTAACGAGGAGGTGCGGTTAGCCGCGACTACCCCGAAGAAGCGTGCGGGAAGGAAGAAGTTCAAGGAGACTCGCCACCCAGTGTATAGGGGTGTGAGGAGGAGGAACAATGATAAATGGGTGTGTGAAATGAGGGAGCCTAACAAAAAGACTAAGATTTGGCTAGGGACATTTCCAACGGTCGAGATGGCAGCCCGAGCCCATGATGTTGCTGCAATGGCATTAAGGGGCCGCTACGCCTGTCTCAACTTTGCAGACTCTGTGTGGCGGCTCCCTAAACCTGCCACCGCTCAAGCAAAAGATATACAAAAGGCAGCTACACTA 402 0.5124 MFPTNNSSSSSDMSLSNSEGSHWMPVVNEEVRLAATTPKKRAGRKKFKETRHPVYRGVRRRNNDKWVCEMREPNKKTKIWLGTFPTVEMAARAHDVAAMALRGRYACLNFADSVWRLPKPATAQAKDIQKAATL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme135729g00001 134 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 133 IPR045277 GO:0003700
Trme135729g00001 134 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Trme135729g00001 134 MobiDBLite consensus disorder prediction 1 21 - -
Trme135729g00001 134 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Trme135729g00001 134 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Trme135729g00001 134 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Trme135729g00001 134 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Trme135729g00001 134 SUPERFAMILY DNA-binding domain 54 113 IPR016177 GO:0003677
Trme135729g00001 134 CDD AP2 55 113 IPR001471 GO:0003700|GO:0006355
Trme135729g00001 134 Gene3D AP2/ERF domain 54 112 IPR036955 GO:0003700|GO:0006355
Trme135729g00001 134 FunFam Ethylene-responsive transcription factor 2 53 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme135729g00001 Trme-Chr135729 181 582 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme135729g00001 1 133 AP2-EREBP Transcription Factor Family AT5G51990 63.971 5.97e-56 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trme135729g00001 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme135729g00001 - - psat:127115660 223.787