Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13570g00001 ATGAGAACAATTTCGTTTAGGGCAGTTGCTATGATATTCCGTTTCTGGTACAAAAAAANTTGGGTTGAACAACTGCACAAAATTTTTAAGTTGTGTGGCTCTCCTGCTGAGGAATATTGGAGGAAGCATAAATTGCCAAATGCTACAATCTTTAAGCCACAGCAGCCATATAAACGTTGTATCTCAGAAACATTCAAGGATTTTCCTCGATCTTCACTACCTCTAATTGAAACTCTTCTTGCAATAGATCCTGATGGTCGTGGCACTGCCTCAGCTGCTCTAAATCATGAATTTTTTACCACCGAGCCCTATGCTAGTGAACCGTCGAGTTTGCCAAAGTATCCTCCTAGCAAAGAATTGGATGTAAAAATGAGAGATGAAGAAGCTAGAAGGCAAAAAGCACTAAATGGAAAATCTAATGGAGTTGATGGTACCAAAAGAGCCAGAGCACGTGAGCGTAGTCGAGCTATTCCGGCACCAGAAGCTAATGCAGAGAACCAAACAAACTTAGATAGGTGGAGAGTAGTGACCCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCACCTCATCAAGATGGAGCTGTTGGATATCCACAA 603 0.4129 MRTISFRAVAMIFRFWYKKXWVEQLHKIFKLCGSPAEEYWRKHKLPNATIFKPQQPYKRCISETFKDFPRSSLPLIETLLAIDPDGRGTASAALNHEFFTTEPYASEPSSLPKYPPSKELDVKMRDEEARRQKALNGKSNGVDGTKRARARERSRAIPAPEANAENQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPQ 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13570g00001 201 Gene3D Transferase(Phosphotransferase) domain 1 9 139 - -
Trme13570g00001 201 MobiDBLite consensus disorder prediction 144 158 - -
Trme13570g00001 201 MobiDBLite consensus disorder prediction 126 201 - -
Trme13570g00001 201 SUPERFAMILY Protein kinase-like (PK-like) 13 104 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13570g00001 Trme-Chr13570 1 1401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13570g00001 23 133 Core Cell Cycle Gene Families AT5G10270 43.697 1.17e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13570g00001 K08819 - gmx:100807756 332.798