Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme135523g00001 ATGCTGGTTACAACACTGTTGATGATTTTGGTCATGATATTAGTTTGGCACTGTCATTGGATTCTTGTCGTTGTATTCACCGGCTTATCATTGATTGTCGAATGCACATACTTCTCTGCCGTACTCTTCAAAGTCGATCAAGGTGGATGGGCTCCCCTTGCAATTGCCGGAGTATTTCTGATTGTAATGTATGTTTGGCATTACGGTACGGTGAAGCGCTACGAGTTTGAATTGCATAGCAAAGTCTCAATGGCATGGATTCTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGCCTAGTCTATACAGAGCTTGCAAGTGGAGTTCCCCACATATTTTCTCATTTCATTACAAACCTACCAGCACTCCATTCCGTTGTTGTTTTCGTGTGTGTGAAATATCTTCCTGTCTACACCGTCCCGGAAGAAGAGCGGTTCCTTGTCAAGCGTATCGGACCAAAGAATTACCACATTTTTCGGTGTGTGGCGCGATATGGATATAAAGACTTGCATAAGAAAGACGATGATTTCGAGAAGAAA 552 0.3967 MLVTTLLMILVMILVWHCHWILVVVFTGLSLIVECTYFSAVLFKVDQGGWAPLAIAGVFLIVMYVWHYGTVKRYEFELHSKVSMAWILXXXXXXXXXXXXXXGLVYTELASGVPHIFSHFITNLPALHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNYHIFRCVARYGYKDLHKKDDDFEKK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme135523g00001 184 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 183 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trme135523g00001 184 Pfam K+ potassium transporter 1 173 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme135523g00001 Trme-Chr135523 1 552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme135523g00001 1 184 Inorganic Solute Cotransporters AT2G35060 77.717 4.47e-102 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme135523g00001 K03549 - lja:Lj6g3v1382280.1 324.709