Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13531g00001 TCACCATCAGCAGTGATACATAAGAGCCATGAAGTGAAAATACCRGCTCCATTTGTTGCTTCTTTTTCATCTAGGGGTCCAAATCCAGGATCTCAGCATATTCTCAAGCCTGATGTAACAGCTCCCGGCATTAACATCTTGGCATCATATACCCTTAGGACATCAATTACTGGTTTAGAAGGGGACACTCAATTTTCAGAATTTACACTAATGTCCGGTACTTCCATGTCATGCCCTCATGTTTCCGGAGTTGCAGCATATGTGAAATCATTTCACCCGGATTGGACTCCTGCTGCAATCAGATCAGCTATAATTACCACAGCTAAACCAATGAGCCAAAAAGTTAACAAGGAAGCAGAGTTTGCTTTTGGTGCCGGTCAAGTTAACCCAACAAGAGCCGTGAATCCTGGTTTAGTCTACGACATGGATGACCTCGCCTATATCCA 446 0.435 SPSAVIHKSHEVKIPAPFVASFSSRGPNPGSQHILKPDVTAPGINILASYTLRTSITGLEGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPDWTPAAIRSAIITTAKPMSQKVNKEAEFAFGAGQVNPTRAVNPGLVYDMDDLAYI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13531g00001 148 Pfam Subtilase family 19 126 IPR000209 GO:0006508|GO:0008236
Trme13531g00001 148 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 148 IPR045051 -
Trme13531g00001 148 Gene3D - 3 12 - -
Trme13531g00001 148 SUPERFAMILY Subtilisin-like 19 138 IPR036852 GO:0004252|GO:0006508
Trme13531g00001 148 ProSiteProfiles Serine proteases, subtilase domain profile. 1 134 - -
Trme13531g00001 148 Gene3D Peptidase S8/S53 domain 13 144 IPR036852 GO:0004252|GO:0006508
Trme13531g00001 148 ProSitePatterns Serine proteases, subtilase family, serine active site. 73 83 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13531g00001 Trme-Chr13531 77 1204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13531g00001 1 122 Subtilisin-like Serine Gene Family AT4G00230 70.492 7.76e-56 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13531g00001 - - ccaj:109800351 274.633