Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13528g00001 TATTGTACTGGTGGAATCAGGTGCGAAATGGCATCAGCATATATTAGGTCAAAAGGTGCTGGGTTTGAGAATGTGTTTCAGTTATTTGGTGGTATACAACGGTATTTGGAGCAATTCCCAGATGGTGGTTATTTCAAAGGAAAGAATTTTGTTTTTGATCACCGGGTAGTTTTGCAACAATCGGATAAAACGAATCCTTATTTCATTTCTTCTATGGCTGTAGGATATCAGTTGGAGGTTCAGTTGCTAGTACAATTGGTACCTGTCTTATATGTCAATGTTCCTTTGACGATTACTCTTCACGCTGTCGATGTACTTATTGCAGAATGCTTGTCTTGGTTTGCCATAGTTGCCAGAATGAATCTGCGCAGTACGTTTGTGAGCTATGCCAAAAACAGGGTAAGGCTGTTGGGTCAAAGCAGTTAA 426 0.4014 YCTGGIRCEMASAYIRSKGAGFENVFQLFGGIQRYLEQFPDGGYFKGKNFVFDHRVVLQQSDKTNPYFISSMAVGYQLEVQLLVQLVPVLYVNVPLTITLHAVDVLIAECLSWFAIVARMNLRSTFVSYAKNRVRLLGQSS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13528g00001 141 ProSiteProfiles Rhodanese domain profile. 1 44 IPR001763 -
Trme13528g00001 141 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 1 63 IPR020936 -
Trme13528g00001 141 Gene3D - 1 77 IPR036873 -
Trme13528g00001 141 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 1 56 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13528g00001 Trme-Chr13528 90 1451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13528g00001 1 63 Sulfurtransferasese or Rhodanese AT1G09280 82.540 1.02e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13528g00001 - - mtr:25484701 124.79