Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13523g00001 GATAATAACATCGAGTTTTGGAGGAAGTTTGTTGCTGAGTATTTTGCTCCCAATGCGAAGAAGAAGTGGTGTGTTTCTATGTATGGAAGTAGCGACAAACGACTGGAGTTTTCCCTCAGGATGTATGGCACTGCGGAATATGTAATCGCAAACCTGGCCGTGGCAACTGTTGAGGTTCTTCCCAGGCTTTACAAGATAAAGTATGAAAGTGGTACTCTGGAAGAGCTACTTTATGTTGACATGCCCCGTGAATATCATAATTCCTCGGGCCAAATTGTTCTAGACTATGCAAAAGCGATACAAGAAAGTGTTTTTGAGCAACTTCGTGTTGTTTGTGATGGTCAACTTCGAATAGTTTTCTCTTCAGACCTGAAGGTAGCGTATAGAAATCAAAACATATATGCTCCTGGGAATTTTGAGCCTGTCGGCACGAAGAGCTCATCCCCAGAAGATTGTTACCATATAGAATACATTAACTTTTTTTGA 486 0.4115 DNNIEFWRKFVAEYFAPNAKKKWCVSMYGSSDKRLEFSLRMYGTAEYVIANLAVATVEVLPRLYKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVCDGQLRIVFSSDLKVAYRNQNIYAPGNFEPVGTKSSSPEDCYHIEYINFF 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13523g00001 161 PANTHER LIM DOMAIN-BINDING PROTEIN 1 125 IPR029005 -
Trme13523g00001 161 Pfam LIM-domain binding protein 1 126 IPR029005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13523g00001 Trme-Chr13523 123 1103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13523g00001 1 126 C2H2 Transcription Factor Family AT1G43850 69.118 1.79e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13523g00001 - - gmx:100799771 186.808