Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme13517g00001 TTTACGTGTCCTCCAAACTTCACTTCTGAGGAAAAACTTCCTCCTCCTAGTCATTTGAAGGGTTTTAAGGAGGAAATTGCACCCAATGGGGAATTAGGATTTCCTCAGAAGCAGTTCCTCGTCATTGATCAAACGGGTGATCAAACAACTCTCATTTATAGTTCAAGATTTGGGAGCCCTGTTGAGTGCCTCGGTTCCTGGGATTCAAAATTGCATGGTTGTAACAATTTTAATGGGAATAATGAACCTTCTTTAAGAAGAGACGTGAATCATGTGGTTGGACTTGGATTTGAACCGACTTTTGATTATAAAGTTGATGAAAATGATAATCAAGGAACTGAGATTGAAAGCGAGATGCACGAAGACACAGAGGAGATCAATGCATTGCTTTACTCAGACAGCGATGCCGATGGTTATTCTACCGAGGATGATGAAGTTACCAGCACTGGGCATTCACCCAGTACAATGACCACTCATGATAACCAGGAACCTTTCCGAATTGGAGGAATCGCCGAAGAAGTTGCTAGCTCCTCCCCTGGAAGAACAAAGAAACGTAAGCTATTCAATGTGGCTTATGATCATGATGATGTGCAGTTTATAGACACTGCAAATTCTCTAAAACAAAAGCGACGCTTCGACCACATGGGATATGATGACGATGCAGAATCCAGATGCTCTGGTAGCAATTGCGGTCGAGGGTCATGTGAAATGGGTTCCTTAACAGGCACTAAGAAGATGAGAAAGGAAAAGATTCATGATGTTCTAAGCATTTTGCAGTGCATAGTTCCTAATGGGAAGGACAAGGAACCAGTCCAGCTTCTTGATGAAGCCATACATTGCTTGAAATCTTTGAAACTCAAGGCTAGAGCTCTTGGTCTCAATGCGATGTAA 891 0.4231 FTCPPNFTSEEKLPPPSHLKGFKEEIAPNGELGFPQKQFLVIDQTGDQTTLIYSSRFGSPVECLGSWDSKLHGCNNFNGNNEPSLRRDVNHVVGLGFEPTFDYKVDENDNQGTEIESEMHEDTEEINALLYSDSDADGYSTEDDEVTSTGHSPSTMTTHDNQEPFRIGGIAEEVASSSPGRTKKRKLFNVAYDHDDVQFIDTANSLKQKRRFDHMGYDDDAESRCSGSNCGRGSCEMGSLTGTKKMRKEKIHDVLSILQCIVPNGKDKEPVQLLDEAIHCLKSLKLKARALGLNAM 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme13517g00001 296 MobiDBLite consensus disorder prediction 143 162 - -
Trme13517g00001 296 PANTHER TRANSCRIPTION FACTOR BHLH145 10 294 IPR037546 -
Trme13517g00001 296 MobiDBLite consensus disorder prediction 134 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme13517g00001 Trme-Chr13517 59 949 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme13517g00001 36 289 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 32.677 1.14e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme13517g00001 - - tpra:123920090 580.096