Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1351655g00001 ATGGACCTTTTCAATGAGTGTATGAAGACTGTTGAGAGTTGTCTTACTGATTCAAAGATGGACAAGAGTAGTGTAGATGATGTTGTTCTTGTGGGTGGCTCATCTAGGATTCCCAAAGTGCAGGAAATATTGAGTAATTTCTTCAATGGGAAGGATTTGTGCAAGAGCATCAACCCTGATG 181 0.4033 MDLFNECMKTVESCLTDSKMDKSSVDDVVLVGGSSRIPKVQEILSNFFNGKDLCKSINPD 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1351655g00001 60 SUPERFAMILY Actin-like ATPase domain 2 60 IPR043129 -
Trme1351655g00001 60 ProSitePatterns Heat shock hsp70 proteins family signature 3. 28 42 IPR018181 -
Trme1351655g00001 60 PRINTS 70kDa heat shock protein signature 57 60 - -
Trme1351655g00001 60 PRINTS 70kDa heat shock protein signature 25 41 - -
Trme1351655g00001 60 PANTHER HEAT SHOCK PROTEIN 70KDA 1 60 IPR013126 GO:0005524|GO:0140662
Trme1351655g00001 60 Pfam Hsp70 protein 2 60 IPR013126 GO:0005524|GO:0140662
Trme1351655g00001 60 Gene3D - 1 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1351655g00001 Trme-Chr1351655 1 181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1351655g00001 1 60 Calmodulin-binding Proteins AT5G02500 75.000 1.39e-27 100