Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134976g00001 GGAAGTGAGGCAATCAGAAGTATGGCCATCAGACTATCTGAAATTAAGGAGCTGCAGTTAAGTCCACAAGTATTTTCCAAGATGAGAAGATTGAAATTTTTGGATATTTATACTAATGGATCTCAAAATGAAGGGAGTTTGTCTCTTCCTCAAGGGCTTGAATCCTTGCCTAATGAACTGAGATATCTTCGTTGGGAGTATTACCCTTTGGATTCCTTGCCATCCAAGTTTTCTGCAGAAAACCTTGTTACATTGAACTTGCCTTATAGCCAACTGAAAAAACTTTGGCATGGAGTGAAGGTTGGTTCTAAATGGAACAGGAGCTTGTGA 330 0.3939 GSEAIRSMAIRLSEIKELQLSPQVFSKMRRLKFLDIYTNGSQNEGSLSLPQGLESLPNELRYLRWEYYPLDSLPSKFSAENLVTLNLPYSQLKKLWHGVKVGSKWNRSL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134976g00001 109 Gene3D Ribonuclease Inhibitor 4 101 IPR032675 -
Trme134976g00001 109 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 100 IPR044974 GO:0006952
Trme134976g00001 109 Pfam Leucine Rich Repeat 81 100 IPR011713 -
Trme134976g00001 109 SUPERFAMILY RNI-like 18 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134976g00001 Trme-Chr134976 99 506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134976g00001 1 101 WRKY Transcription Factor Family AT4G12020 47.525 1.10e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134976g00001 - - tpra:123883106 198.749