Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134755g00001 ATGAGGGATCCAGAAATTTGGGAAGATCCAAATGAATTTCATCCTGAGAGGTTCTTGAAAGAAAAAGATGATTCAAGTAGTGATCATGATTATCAGAATGATGCTAAAAGAATGGAGTTCAATTTTGTTCCATTTGGAGCAGGAAGGAGAGGGTGTCCAGGGACAGCACTAGCATTTAACTTGATGAACACTGCTGTTGCTGCTATGGTTCAGTGCTTTGATTGGAAAATTGGTGAAGATGGAAAAGGAGAAAAGGTTGATATGCAATCTGGTTCTGGCATGTCTTTAGGCATGGTTCATCCACTTATTTGTATTCCTGTTGTACATTTTAATCCATATGATGAATAA 348 0.3793 MRDPEIWEDPNEFHPERFLKEKDDSSSDHDYQNDAKRMEFNFVPFGAGRRGCPGTALAFNLMNTAVAAMVQCFDWKIGEDGKGEKVDMQSGSGMSLGMVHPLICIPVVHFNPYDE 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134755g00001 115 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 45 54 IPR017972 GO:0005506|GO:0016705
Trme134755g00001 115 Gene3D Cytochrome P450 1 108 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme134755g00001 115 Pfam Cytochrome P450 2 91 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme134755g00001 115 SUPERFAMILY Cytochrome P450 1 106 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme134755g00001 115 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 99 - -
Trme134755g00001 115 MobiDBLite consensus disorder prediction 1 32 - -
Trme134755g00001 115 PRINTS E-class P450 group IV signature 36 52 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme134755g00001 115 PRINTS E-class P450 group IV signature 52 70 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme134755g00001 115 PRINTS E-class P450 group IV signature 1 19 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134755g00001 Trme-Chr134755 153 500 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134755g00001 1 112 Cytochrome P450 AT3G20120 48.214 4.43e-34 121