Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134614g00001 ACTGCTGGTGATACTCACCTAGGAGGAGAGGACTTTGATAATAGAATGGTGAATCACTTTGTGAATGAGTTGAAGAGGAAGAAGAATGTGGACATTAGTGGGAACCCAAAAGCATTAAGAAAGCTGAGAACTGCTTGTGAGAGGACAAAGAGGGCACTTTCATTTGACATTGAGGCCACAATTGACATAGATGCTATTTGTCAGGGTATTGACTTCAGCTCATCAATTACTCGGGCCAAGTTTGAGCAAGTCAACATGGAACTCTTTGAAAAATGTATGGAGATTGTTGGGAGTTGTCTGCGTGATGCTAACATGGTCAAGAGTAGTGTAGATGATATCGTCCTTGTTGGGKGTTCTTCTAGAATTCCCAAAGTGCGGCAACTATTGCAAGACTATTTCAAGGGGAAGGGTTTGTGCATGAGCATCAACCCTGATGAATCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGCTGATTGAAGGTATTGAGAATGTTCCAAATCTGGTTGTGCAAGATGTTACACCTTTGTCGCTTGGTATATTGACAAAAGGAGATATCATGAGCGTGGTTATTCCTAAGA 583 0.4237 TAGDTHLGGEDFDNRMVNHFVNELKRKKNVDISGNPKALRKLRTACERTKRALSFDIEATIDIDAICQGIDFSSSITRAKFEQVNMELFEKCMEIVGSCLRDANMVKSSVDDIVLVGXSSRIPKVRQLLQDYFKGKGLCMSINPDESVAYGAAVQAALLIEGIENVPNLVVQDVTPLSLGILTKGDIMSVVIPK 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134614g00001 194 PRINTS 70kDa heat shock protein signature 110 126 - -
Trme134614g00001 194 PRINTS 70kDa heat shock protein signature 168 187 - -
Trme134614g00001 194 PRINTS 70kDa heat shock protein signature 142 162 - -
Trme134614g00001 194 PANTHER HEAT SHOCK PROTEIN 70KDA 1 194 IPR013126 GO:0005524|GO:0140662
Trme134614g00001 194 Gene3D - 1 139 - -
Trme134614g00001 194 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 157 194 IPR029047 -
Trme134614g00001 194 Pfam Hsp70 protein 1 193 IPR013126 GO:0005524|GO:0140662
Trme134614g00001 194 Gene3D Actin; Chain A, domain 4 8 91 - -
Trme134614g00001 194 Gene3D - 140 156 - -
Trme134614g00001 194 FunFam Heat shock 70 kDa 8 91 - -
Trme134614g00001 194 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 164 194 IPR029047 -
Trme134614g00001 194 SUPERFAMILY Actin-like ATPase domain 1 159 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134614g00001 Trme-Chr134614 3 585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134614g00001 1 194 Calmodulin-binding Proteins AT3G12580 68.718 2.75e-92 280