Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134607g00001 TATGAGTATGTTGGCAATGGAACTGTGTATGATCATCTTCATGGTGACGAAGCAATACATGCCAGACTTCCTTGGAATGCTAGGATGAATATTGCCGTGGAGACAGCTAGGGCATTGATGTATGTCCATCGTTATAACATCATTCACGGAGACATCGAAACCCGAAATATTCTTCTCAACACCGATTTGCATGTCAAATTAGGAGACTTTGGACTATCCCACTGTTTGCCAAATGGTCATAGCCATGTTTCAACATATCCACTAGGGACTCTTGGTTATATAGATCCTGAGTATCGTAGGACGCCTCAGCTTACTCGTAAAAGCGACGTATTCAGCTTTGGAGTAGTGATGATGGAGCTTATATCATCTTTGCCTCCTTATGATAATACAAGGGCTGATCAATATCTGTCTGACATGGCTATGAGCAGAATTGAAAATGATGCTTTGGATCAACTCGTGGATCCTACCCTATGTTTTGATTTAGATCCCAACGTAAATGGAATGATAAGTGGCGTGGCTGCGTTAGCATATAGGTGCCTTCACCCTTCCAAAGTTATGAGACCTTCCATGGATGAAGTGCTTGCA 585 0.4239 YEYVGNGTVYDHLHGDEAIHARLPWNARMNIAVETARALMYVHRYNIIHGDIETRNILLNTDLHVKLGDFGLSHCLPNGHSHVSTYPLGTLGYIDPEYRRTPQLTRKSDVFSFGVVMMELISSLPPYDNTRADQYLSDMAMSRIENDALDQLVDPTLCFDLDPNVNGMISGVAALAYRCLHPSKVMRPSMDEVLA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134607g00001 195 Pfam Protein kinase domain 2 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme134607g00001 195 Gene3D Transferase(Phosphotransferase) domain 1 4 195 - -
Trme134607g00001 195 SUPERFAMILY Protein kinase-like (PK-like) 1 195 IPR011009 -
Trme134607g00001 195 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme134607g00001 195 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 194 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134607g00001 Trme-Chr134607 1 585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134607g00001 1 194 Receptor kinase-like Gene Family AT1G25390 48.731 7.19e-57 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trme134607g00001 Pkinase 8.4e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134607g00001 - - mtr:11438730 235.343