Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134519g00001 TTAGGTAAAGATAAGGAACCATTGGATTGGGAAACAAGAATGAAAATTGCTGATGGAGCAGCTAGAGGACTTGAATATCTGCATAATTCTGCAGATCCACCGGTGATTTTCCGCGATTTTAAATCGTCTAATATACTATTAGATGAAAATTTCAATGCAAAGCTTTCTGATTTTGGTCTTGCTAAGATTGCTCCAAAAGAAGGTGAGAACTTGGTCACAACTAGGGTTATGGGGACCTATGGCTACTGTTCACCAGAGTATGCTGCCACCGGTAAATTAACCTC 284 0.3979 LGKDKEPLDWETRMKIADGAARGLEYLHNSADPPVIFRDFKSSNILLDENFNAKLSDFGLAKIAPKEGENLVTTRVMGTYGYCSPEYAATGKLTS 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134519g00001 95 Gene3D Transferase(Phosphotransferase) domain 1 1 95 - -
Trme134519g00001 95 FunFam Protein kinase superfamily protein 1 63 - -
Trme134519g00001 95 PANTHER OS07G0668900 PROTEIN 3 94 - -
Trme134519g00001 95 Pfam Protein kinase domain 11 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme134519g00001 95 SUPERFAMILY Protein kinase-like (PK-like) 6 91 IPR011009 -
Trme134519g00001 95 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134519g00001 Trme-Chr134519 302 585 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134519g00001 1 95 Glycoside Hydrolase AT3G07070 65.263 1.11e-40 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trme134519g00001 Pkinase 2.6e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134519g00001 - - vvo:131599912 175.252