Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134477g00001 TTACCGAAAGCTAGAGTTGCAGCCTACAAGGTGTTCGGTTACGAGCCAGACATATTATCTGCTTTTAATCATGCCATCACTGATGGGGTTGATGTTATATCAATCTCCATGAATTCTAAATTCCCCAGTGAATTTATTGGCTCCGGTTTTGCCATAGGGTCATTCAATGTCGTAGCTAATGGCATAATTATTGTGAATTCCGGAGGAAACTATGGACCTTCTCCTTATACCCTAACCAATGTGGAACCATGGGTAATCACTGTTGCTGCAAGCACAACAGATCGAGACTTCTTTAGTTATGTTACACTTGGCAACAAAAAAGTTCTTGAGGGAGCAAGCTTTCATGGGTCTGGCATGCCATCAGGGAAGTTCTACCAATTGATCAAGGGTGCTGATGCCAAAGCCCCCAAAGCATCTAGGAGAAAAGCGTAA 432 0.4306 LPKARVAAYKVFGYEPDILSAFNHAITDGVDVISISMNSKFPSEFIGSGFAIGSFNVVANGIIIVNSGGNYGPSPYTLTNVEPWVITVAASTTDRDFFSYVTLGNKKVLEGASFHGSGMPSGKFYQLIKGADAKAPKASRRKA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134477g00001 143 Gene3D - 94 140 - -
Trme134477g00001 143 SUPERFAMILY Subtilisin-like 2 120 IPR036852 GO:0004252|GO:0006508
Trme134477g00001 143 ProSiteProfiles Serine proteases, subtilase domain profile. 1 143 - -
Trme134477g00001 143 Pfam Subtilase family 2 104 IPR000209 GO:0006508|GO:0008236
Trme134477g00001 143 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 135 IPR045051 -
Trme134477g00001 143 Gene3D Peptidase S8/S53 domain 2 93 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134477g00001 Trme-Chr134477 2 510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134477g00001 2 139 Subtilisin-like Serine Gene Family AT2G04160 45.890 5.73e-34 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134477g00001 - - lja:Lj0g3v0252169.1 182.57