Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme134447g00001 ATGCAAGCTGCGGCTAAGAGTAATTTAAAACATGTTTCACTTGAATTAGGAGGCAAGTCACCTCTTATTATTTTCGATGATGCTGACGTAGACAAAGCTGCTGACCTTGCTCTTCTCGGTATCCTAGCTAACAAGGGAGAAATTTGTGTTGCAAGTTCCCGTGTGTTCGTTCAAGAAGGGATCTACGATCAAGTTGAAAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGATCGTCGGCGATCCTTTTGATCCTAAAAGTCAGCAAGGACCTCAG 273 0.4359 MQAAAKSNLKHVSLELGGKSPLIIFDDADVDKAADLALLGILANKGEICVASSRVFVQEGIYDQVEKKLVEKAKAWIVGDPFDPKSQQGPQ 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme134447g00001 91 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 17 91 IPR016163 GO:0016620
Trme134447g00001 91 SUPERFAMILY ALDH-like 1 90 IPR016161 GO:0016491
Trme134447g00001 91 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 91 - -
Trme134447g00001 91 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 42 53 IPR016160 GO:0016491
Trme134447g00001 91 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 14 21 IPR029510 GO:0016491
Trme134447g00001 91 Pfam Aldehyde dehydrogenase family 2 91 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme134447g00001 Trme-Chr134447 14 382 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme134447g00001 1 91 Aldehyde Dehydrogenase Gene Family AT3G24503 81.319 3.02e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme134447g00001 K12355 - gmx:100811540 156.377